IGV
IGV is open-source software for viewing genomic data. It is available as a desktop application, a browser app, and an embeddable JavaScript…
$0 / not applicableList of Open Source Software | Last updated: November 11, 2026
This page lists the 18 tools in the TechZella directory that are classified under Open Source Software, a software category in our taxonomy. Every profile summarises what the product does, who it suits, what it costs, and where it falls short, based on documented vendor and independent sources rather than hands-on testing. Examples in this group include ClamAV, Darktable, JDownloader, Keycloak, NewPipe, OpenAI Whisper, PrestaShop and React; the list is alphabetical and does not imply a ranking. Across these tools the industries most often documented are Education, Media and Entertainment, E-commerce, Software Development. The most common documented use cases are Batch Image Processing, RAW photo development, Multichannel selling, Non-destructive photo editing. Platform support most often listed is Linux, macOS, Windows, API. To compare options, open each profile and read the Decision Snapshot, the pricing and total cost sections, and the Gotchas, then check the alternatives listed for the products you are considering. Features, pricing and availability change, so confirm current details with each vendor before you decide.
Software discovery — this page combines TechZella's software profiles, structured comparisons, category guidance, and related topics to help you evaluate open source software software.
Editorial content availableStart here to understand what open source software software does, which teams commonly use it, and what to look for before comparing individual products.
This page lists the 18 tools in the TechZella directory that are classified under Open Source Software, a software category in our taxonomy. Every profile summarises what the product does, who it suits, what it costs, and where it falls short, based on documented vendor and independent sources rather than hands-on testing. Examples in this group include ClamAV, Darktable, JDownloader, Keycloak, NewPipe, OpenAI Whisper, PrestaShop and React; the list is alphabetical and does not imply a ranking. Across these tools the industries most often documented are Education, Media and Entertainment, E-commerce, Software Development. The most common documented use cases are Batch Image Processing, RAW photo development, Multichannel selling, Non-destructive photo editing. Platform support most often listed is Linux, macOS, Windows, API. To compare options, open each profile and read the Decision Snapshot, the pricing and total cost sections, and the Gotchas, then check the alternatives listed for the products you are considering. Features, pricing and availability change, so confirm current details with each vendor before you decide.
You do not need to evaluate every tool in this category. Start with the job you need to accomplish, the environment you work in, or the platform you need to support, then narrow the software list from there.
Start with the outcome you need. These paths connect the category to specific jobs, workflows and problems that software can help you address.
Your industry can change the features, integrations, compliance needs and workflows that matter. Explore software already associated with these industry contexts.
Platform compatibility can narrow the field quickly. Use these links when the devices or operating environments your team relies on are a key requirement.
These shortlists connect the category to specific jobs and business contexts. They are designed to help you move from a broad category to a few relevant products without treating every tool as equally suitable for every situation.
Explore software associated with this use case and compare the options that appear most relevant to this category.
Explore software associated with this use case and compare the options that appear most relevant to this category.
This page lists the 46 tools in the TechZella directory that are classified under Workflow automation, a use case in our taxonomy. Every profile…
This page lists the 15 tools in the TechZella directory that are classified under Research, a industry in our taxonomy. Every profile summarises what…
This page lists the 15 tools in the TechZella directory that are classified under Life Sciences, a industry in our taxonomy. Every profile summarises…
This page lists the 15 tools in the TechZella directory that are classified under Higher Education, a industry in our taxonomy. Every profile summarises…
Once you understand what you need, use these related category links to broaden or narrow your research. This is navigation rather than another evaluation layer, so it stays compact.
This explains what the information on the page means and how TechZella approaches comparison. It is intended to make the evaluation process easier to understand before you rely on a score or shortlist.
TechZella evaluates Open Source Software software using structured information stored in each profile, documented product capabilities, pricing information, user feedback where available, and evidence collected during research. The evaluation considers features, ease of use, value, performance, support and user sentiment so that the comparison reflects more than a single rating signal.
Use the comparison as a starting point, then check the individual software profile for current pricing, integrations, feature limitations and requirements that matter to your team. A higher TechZella Score does not automatically mean a tool is the right fit for every workflow.
| # | Software / Tool | Best For | TechZella Score | User Rating | Pricing |
|---|---|---|---|---|---|
| 1 | Bowtie 2 | Bowtie 2 is an open-source command-line tool that aligns sequencing reads to… | 7.5/10 | — | Free |
| 2 | HISAT2 | HISAT2 is command-line software for aligning DNA and RNA sequencing reads to… | 7.4/10 | — | $0 |
| 3 | STAR Aligner | STAR is an open-source command-line aligner for RNA sequencing reads, with support… | 7.3/10 | — | $0 |
| 4 | Cytoscape | Cytoscape is an open-source platform for visualizing and analyzing biological and other… | 7.1/10 | — | $0 |
| 5 | IGV | IGV is open-source software for viewing genomic data. It is available as… | 7.0/10 | — | $0 |
| 6 | Samtools | An open-source command-line toolkit for reading, writing, converting, sorting, indexing, and analyzing… | 6.8/10 | — | $0 |
| 7 | Scanpy | Scanpy is an open-source Python toolkit for single-cell gene-expression analysis, covering preprocessing,… | 6.8/10 | — | $0 |
| 8 | GATK | GATK is Broad Institute software for genomic variant discovery, genotyping and sequencing-data… | 6.7/10 | — | Free |
| 9 | RAxML | RAxML is open-source command-line software for maximum-likelihood phylogenetic tree inference, tree and… | 6.7/10 | — | Free |
| 10 | Kallisto | Kallisto is open-source command-line software for estimating transcript abundances from RNA-seq reads… | 6.2/10 | — | $0 |
IGV is open-source software for viewing genomic data. It is available as a desktop application, a browser app, and an embeddable JavaScript…
$0 / not applicableCytoscape is an open-source platform for visualizing and analyzing biological and other complex networks. Its ecosystem includes desktop, browser-based, and developer tools.
$0 / one-timeScanpy is an open-source Python toolkit for single-cell gene-expression analysis, covering preprocessing, visualization, clustering, trajectory inference and differential expression.
$0 / freeKallisto is open-source command-line software for estimating transcript abundances from RNA-seq reads using pseudoalignment.
$0 / one-time
HISAT2 is command-line software for aligning DNA and RNA sequencing reads to reference genomes, including graph indexes representing human genetic variation.
$0 / one-time
STAR is an open-source command-line aligner for RNA sequencing reads, with support for splice-junction and fusion-read detection.
$0 / one-timeBowtie 2 is an open-source command-line tool that aligns sequencing reads to long reference sequences and writes alignments in SAM format.
Free / N/AAn open-source command-line toolkit for reading, writing, converting, sorting, indexing, and analyzing SAM, BAM, and CRAM sequencing alignment files.
$0GATK is Broad Institute software for genomic variant discovery, genotyping and sequencing-data processing, with tools and workflows for germline and somatic analyses.
Free / No subscriptionRAxML is open-source command-line software for maximum-likelihood phylogenetic tree inference, tree and alignment analyses, and evolutionary placement of short reads.
Free